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22Jun 2012

Lots of Ink: In Science, after debate on giving terrorists hints, the second paper on genetically-modified bird flu gets major play

It does sound frightening. H5N1 or the bird flu virus is just five are some other small number of mutations away from being a readily-transmitted human disease that can kill quickly and for which there is no good cure. That's a recipe for pandemic and it ought not be handed out on the street. But another argument has carried the day - even more frightening is the prospect of a global health system with few tools to respond should nature's own meanderingly dangerous evolutionary habits perform the same trick as genetic engineers can now imagine. Many and perhaps most tracker readers are at least generally familiar with long arguments over open publication of research on genetically-modified bird flu. The collective decision was yes, last month Nature carried the first of the two papers in question, from a US team, and this week Science follows with a report from the Dutch team that has performed a similar experimental investigation. This is the paper that got the heavier scrutiny. Its research, as has already been widely reported, developed an altered and experimentally evolved version of the virus that is a ready contagion in a lab animal, the ferret, previously was not easily susceptible to natural H5N1. But the technical details, while many experts were able to figure most of it out, have not been formally circulated.

Maybe it's not that easy, anyway. To get silly for a moment, maybe your dotty grandma's old Chevy Nova is just four mechanical changes and a software update from being a potential champion NASCAR sprinter. Like, a billet steel new crankshaft and bored-out block, full-spec fuel injection, complete roll cage, radical suspension and tire upgrades, and nana swapped out for Dale Earnhardt Jr. And no mufflers to speak of. Not many corner garages could do that. And it'd probably still be a crappy old Nova that'd hit the wall in the first turn.

The journal's editors gave it big space along with a teleconference with authors and other authorities, commentaries from the lead author and by the editor-in-chief, Bruce Alberts, and with six companion papers such as one from a Univ. of Cambridge team on the potential for a natural outbreak of a form easily transmissable among people. It even put the whole package on open access for non-subscribers (see Grist below).  For reporters, doing the story is more obligation than it is intellectually satisfying and fresh journalism. The issues have been covered. The first shoe, at Nature, was perhaps the less significant of the two papers but did prompt coverage too. Yet the explanation of this package's message and significance must be sober and clear. Several big hitters took a swing at it.

Stories:

Grist for the Mill: Science full package of stories ;  AAAS teleconference (requires EurekAlert! password)  transcript; Univ. of Cambridge Press Release ;

Comments

As I mentioned above, This Week in Virology discusses this paper in detail in TWiV 190.
Vincent R. Racaniello, Higgins Professor in the Department of Microbiology and Immunology at Columbia University’s College of Physicians and Surgeons, and guests also discuss some journalistic issues directly.
Highly recommended.

I haven't done a full rundown of the press & blog/writer coverage, but there doesn't seem to be much on the usefulness of ferret models. Science (to their great credit) did carry one commentary critical of the predictive & inferential value of ferret transmissibility findings. This was downplayed during the press conference, though, and I realized after writing that I'd been far less skeptical/questioning of the animal modeling than I should have been. If these findings are less useful than they seem -- and a big question is, how are they falsifiable? How can they be usefully tested? -- than obviously the risk/benefit equation changes hugely.

On the flip side, maybe the findings *are* extremely useful. But there's something disturbing about the nature of the scientific discussion (separate from the security discussion) ... rumblings about researchers being unwilling to publicly raise legitimate questions about the merits of this & Kawaoka's research because it's become so politicized, and the because people conducting the research have a strong influence within their community on channeling those all-important NIH research funds. And with the heads of NIH and NIAID coming out so forcefully in support of the work, a researcher would need to be very brave and independent to cross them.

I highly recommend the several episodes of This Week in Virology on this research and the first paper. I assume they'll cover the latest paper in one of the next few episodes.

McNeil Jr.'s lede:
"The more controversial of two papers describing how the lethal H5N1 bird flu could be made easier to spread was published Thursday, six months after a scientific advisory board suggested that the papers’ most potentially dangerous data be censored."

Only about ten grafs later does he reveal that the same board reversed itself long before either paper was published. The reversal came about, by the way, after the first face-to-face meeting of that board on this issue and after the WHO recommended publication.
The lede implies that the scientists and Science published in spite of the board's recommendation.
And only in the last graf does he mention that none of the research was done in secret, and that it was presented at meetings long before any controversy arose.
And the use of "super weapon" is at least highly questionable.

Greenfield-Boyce:
"The H5N1 bird flu virus isn't normally contagious between people, but these mutants most likely are."
Except that there's no evidence that these viruses would be contagious by aerosol transmission in humans.
She also emphasizes headlines as much as the actual research or the reaction of virologists.

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